宜博 / lemonboss

…day window, skip old files

…writes (4KB/1s), remove messages.log fallback in loadHistory

…to prevent EADDRINUSE

1. Workspace page: left file tree + right detail/editor panel
   - File info: name, path, size, created/modified timestamps
   - Three view modes: Code / Preview / Edit with save
   - HTML files auto-open in Preview tab (sandboxed iframe)

2. Backend APIs:
   - GET/PUT /:companyId/workspace/files (list + content + save)
   - PUT /:companyId/files/content (company file save)

3. Navbar: removed Skills/Jobs/Pipeline, added Workspace
4. All nav links open in new tabs (target=_blank)

- Fixed .gitignore: data/system/ prefix was missing (old paths never matched)
- Removed tracked memory/, conversations/, uploads/, .tasks/ files
- Only memory.md and hippocampus.md are kept (template skeleton)

- Added inline editing for template description and type fields
- Implemented Delete Template functionality (removes both file system and registry entry)
- Added confirmation safeguards for the destructive delete action

Architecture fix for long-running tool execution:

1. ClaudeCliProtocol: Two-tier idle timeout
   - Chat mode: 45s (detect API hang/silent rate limit)
   - Tool execution mode: 5min (Bash long tasks like pip install)
   - Automatically switches on tool_use_start / content_block_stop events

2. Provision API: POST /templates/:templateId/provision
   - Runs shell commands directly via child_process.exec
   - Bypasses Claude ACP entirely (no idle timeout issue)
   - 10min per-command timeout, security blocklist
   - Frontend button with prompt for custom commands

3. Template UI: Added 🔧 安装依赖 button (teal)

Fixed 4 hidden bugs where path.join(DATA_ROOT, "system", ...) was used instead
of direct path.resolve to root-level system/:

- agent-chat.js: billing log scan (line 804) and agent list scan (line 909)
- company-service.js: TEMPLATES_DIR and GLOBAL_AGENTS_DIR constants
- heartbeat-service.js: system agents scan directory

These were missed because they used path.join with a variable (DATA_ROOT)
rather than the literal string "data/system" that sed caught.

- Moved data/system/ → system/ (agents, templates, skills, data, workspace)
- Updated all server route/service path references
- Updated all script path references
- Updated all documentation references
- Restructured .gitignore for cleaner system/ vs data/ boundary

system/ = platform-shared assets (system agents, template library)
data/ = tenant-specific company instance data

…aruncreate skill paths

- Upload skill files to .claude/skills/ (Claude Code ACP reads from here)
- Add conversation type filter (user/callback/task/train) to AgentChat
- Parse messages.log for richer conversation history display
- Fix idearuncreate template & company agent skill directory structure
- Add adm-zip dependency for ZIP extraction
- Add fs/path top-level requires in company.js

# Conflicts:
#	data/system/agents/agent-creator/memory/memory.md
#	data/system/agents/innovator/memory/hippocampus-index.json
#	data/system/agents/innovator/memory/hippocampus.md
#	data/system/agents/innovator/memory/memory.md
#	data/system/agents/master/memory/cerebellum/task-callback.md
#	data/system/agents/master/memory/hippocampus-index.json
#	data/system/agents/master/memory/hippocampus.md
#	data/system/agents/master/memory/memory.md

- Add TaskTimeline.vue: two-pane dashboard with task list + message timeline
- Add task-service.js: aggregate cross-agent conversations into task tree
  - 4-strategy parent-child inference (explicit meta, time-overlap, conv→tpl, master→T)
  - Read messages.log for full tool call details (not just history.json)
- Add tasks.js API routes: GET /api/tasks, GET /api/tasks/:taskId/timeline
- Mount /api/tasks in agent-server.js
- Add 'Task Logs' nav entry in AppNav.vue after Templates
- Support taskId in URL (/tasks/:taskId?) for sharing/bookmarking
- Add --parent flag to CLI task dispatch for explicit parentTaskId
- Auto-detect parentTaskId in task/dispatch from sender's active task
- Add --instructions flag to template train CLI command
- Update master tools.md with new parameters

…ictly enforce empty shell company creation

…th time-based multi-dimension token tracking charts

…en costs across agents