宜博 / lemonboss

- Added inline editing for template description and type fields
- Implemented Delete Template functionality (removes both file system and registry entry)
- Added confirmation safeguards for the destructive delete action

Architecture fix for long-running tool execution:

1. ClaudeCliProtocol: Two-tier idle timeout
   - Chat mode: 45s (detect API hang/silent rate limit)
   - Tool execution mode: 5min (Bash long tasks like pip install)
   - Automatically switches on tool_use_start / content_block_stop events

2. Provision API: POST /templates/:templateId/provision
   - Runs shell commands directly via child_process.exec
   - Bypasses Claude ACP entirely (no idle timeout issue)
   - 10min per-command timeout, security blocklist
   - Frontend button with prompt for custom commands

3. Template UI: Added 🔧 安装依赖 button (teal)

- Moved data/system/ → system/ (agents, templates, skills, data, workspace)
- Updated all server route/service path references
- Updated all script path references
- Updated all documentation references
- Restructured .gitignore for cleaner system/ vs data/ boundary

system/ = platform-shared assets (system agents, template library)
data/ = tenant-specific company instance data

…aruncreate skill paths

- Upload skill files to .claude/skills/ (Claude Code ACP reads from here)
- Add conversation type filter (user/callback/task/train) to AgentChat
- Parse messages.log for richer conversation history display
- Fix idearuncreate template & company agent skill directory structure
- Add adm-zip dependency for ZIP extraction
- Add fs/path top-level requires in company.js

- Add TaskTimeline.vue: two-pane dashboard with task list + message timeline
- Add task-service.js: aggregate cross-agent conversations into task tree
  - 4-strategy parent-child inference (explicit meta, time-overlap, conv→tpl, master→T)
  - Read messages.log for full tool call details (not just history.json)
- Add tasks.js API routes: GET /api/tasks, GET /api/tasks/:taskId/timeline
- Mount /api/tasks in agent-server.js
- Add 'Task Logs' nav entry in AppNav.vue after Templates
- Support taskId in URL (/tasks/:taskId?) for sharing/bookmarking
- Add --parent flag to CLI task dispatch for explicit parentTaskId
- Auto-detect parentTaskId in task/dispatch from sender's active task
- Add --instructions flag to template train CLI command
- Update master tools.md with new parameters

- Updated `POST /api/company/create` to create an empty shell without bootstrapping CXO/HR automatically.
- Updated `master/agent.md` instructions so Master Agent handles all Template library hirings.
- Renamed 'MasterBot' navigation link to 'System Agents'.
- Updated AgentChat sidebar to only show System Agents when accessed via the System Agents link.

- GET /api/company/templates/:id/logs scans system agent conversations
- Logs stored in system agents (agent-creator/innovator), NOT in template dir
- Template directories stay clean for copying
- Collapsible log cards with status, time, message count, and output summary
- Auto-poll during generate/train actions (10s/15s intervals)

- POST /api/company/templates: scaffold new template via AgentScaffold
- POST /api/company/templates/:id/generate: trigger agent-creator to write definitions
- POST /api/company/templates/:id/train: trigger innovator FDE training pipeline
- PUT /api/company/templates/:id/files/content: save template file content
- TemplateAgents.vue: create form, action buttons, editable preview, status banner

- CompanyDashboard Goals Tab: upgraded from flat list to full OKR tree view
  with progress bars, node hierarchy, status animations, owner/priority badges
- ClaudeCliProtocol: added --effort flag support (low=disable thinking)
- agent-chat.js: per-agent effort config from config.json cli.effort
- .gitignore: exclude data/companies/, apiconversation/, agent memory/tasks
- New views: TemplateAgents, JobsPanel, PipelineEditor, SkillsMarket
- docs/architecture-v5.md: added decision #13 (thinking control)

- System agents: 只保留 master (data/system/agents/master)
- Templates: 所有可复用 agent 模板 (data/system/templates/)
- Companies: 公司创建时自动部署 5 个元 Agent (innovator/hunter/digester/evolver/agent-creator)

路径修复:
- agent-chat.js: /list 扫描路径修正 (system/agents + companies/*/agents)
- agent-manager.js: 动态 agent 查找路径修正
- skill-config-loader.js: 修正 agents root
- pipeline-service.js: pipelines 输出到 companies/{id}/pipelines/
- billing.log: 移至 companies/{id}/logs/ 下

Skills 标准化:
- 所有 template agent 建立 .claude/skills/main_skill/SKILL.md
- company-service._copyTemplate() 新增 .claude/ 目录复制
- innovator SKILL.md v3.0: 移除旧 l3-hunt/l2-digest 命名
- 清理重复 agent_creator, 统一为 agent-creator

清理:
- 移除 data/agents, data/workspace, data/logs, data/goals 旧目录
- 清除所有未使用的 DATA_DIR 声明
- 清除 template 中的 conversations/logs/memory 运行态数据

Phase A - Company Bootstrap 自举:
- 新增 _company_bootstrap/manifest.json 模板
- company create 时自动部署 CEO/CTO/COO/HR 四名核心骨干
- 自动启动公司 + 2s后向CEO dispatch战略启动令
- 支持 skipBootstrap 参数跳过自举

Phase B - HR 大一统 (招留管退):
- 新增 hr 模板（agent_creator 的进化体）
- HR 具备完整生命周期管理：招聘/技能装配/监控/辞退
- HR 具备模板发现能力（lemon company templates 查看可用模板如 scrapling_crawler）
- CTO 模板重写：不再亲自 hire，全部通过 task dispatch 向 HR 下发招聘需求单
- CEO 模板更新：确认 Bootstrap 已部署骨干，委派时强调 CTO→HR 招聘链
- 新增 POST /company/:id/fire API（停心跳→归档→更新名单）
- 新增 CLI: lemon company fire / lemon company templates

- Added async orchestration in `/company/:id/hire` when no template is found.
- Triggers Agent-Creator to write definition files based on scaffold.
- Searches Arena (skillDb) for 3 basic skills matching the role and injects them.
- Dispatches Innovator to run FDE pipeline and evaluate initial capabilities.

- Agent names are clickable links to chatbot page
- Action button group per agent: heartbeat ▶/⏹, 💬 Chat, 📋 Skills, 🎓 Train
- Expandable skills panel shows agent's loaded skills
- Train button sends instruction to CEO to arrange Innovator training
- Backend: GET /api/company/:id/agents/:agentId/skills API

- Add Company Overview tab as default landing page
- Show company info: status, uptime, agent count, heartbeat status
- Start/Stop company buttons (activate/deactivate all agent heartbeats)
- Per-agent heartbeat controls: interval dropdown, start/stop buttons
- Backend APIs: GET status, POST start/shutdown, PUT/POST agent heartbeat
- Track startedAt timestamp for uptime calculation
- Update CEO agent.md with mandatory 5-step startup workflow
- Fix company nav to default to overview tab

Phase 3 反馈进化闭环:

1. DataSourceService (运营数据接入):
   - 新增 datasource-service.js: 抽象适配器模式
   - MockAdapter: 模拟运营数据 (开发调试)
   - FileAdapter: 从本地 JSON 文件读取数据
   - 可扩展: 预留 WechatAdapter/DouyinAdapter 接口
   - API: GET /data/metrics, /data/trending, /data/attribution

2. 归因分析引擎:
   - analyzeAttribution(): 自动对比两个时间段指标
   - 计算变化百分比和趋势方向
   - 自动提取显著变化维度并生成洞察文本
   - API: GET /api/company/:id/data/attribution

3. Know-how 自动更新 (memory-service.js):
   - 新增 updateAgentKnowhow() 函数
   - autoReflect 产出的 patterns/lessons 自动写回 SKILL.md
   - 在 SKILL.md 末尾维护'经验教训(自动沉淀)'段落
   - 保留最近 20 条记录，自动清理过旧条目
   - 闭环: Agent执行 → 反思 → 经验写入SKILL → 下次读取改进行为

Phase 2 改进:

1. 工作日历系统 (ScheduleService):
   - 新增 schedule-service.js: 公司级日程管理
   - 支持按小时调度、按周几过滤、时区感知
   - 心跳触发时自动检查到期 slots 并触发 Agent
   - 执行去重（同日同 slot 不重复触发）
   - CRUD API: GET/POST/PUT/DELETE /api/company/:id/schedule/slots
   - CLI: schedule add / schedule list

2. 告警通道 (Alert Channel):
   - Pipeline 步骤超时自动告警 Master Agent
   - 心跳异常自动告警 Master Agent
   - _sendAlertToMaster() 统一告警接口

3. CEO → Pipeline 自动生成:
   - CEO 模板从 3 步升级为 5 步工作流
   - 新增 Step 2: Pipeline JSON 设计（含 loop/cron/steps 结构)
   - 新增 Step 4: OKR 创建
   - Pipeline 设计输出为 CTO 搭建流水线的蓝图

4. Master 晨会日报:
   - 每天 08:00 自动生成全公司运营日报
   - 包含公司状态、Pipeline 运行、OKR 进度、Agent 活跃度
   - 自动推送给 Master Agent
   - 防重复机制（每天只生成一次）

5. Pipeline 驳回信息注入:
   - 驳回步骤被心跳重新触发时，__rejection 信息注入 prompt
   - 让 Agent 知道被驳回的原因和重做次数
   - 替换原有 curl 汇报指令为 task report CLI

Phase 1 核心改进:

1. Pipeline↔Task 系统打通:
   - task/report 回调自动推进 Pipeline 步骤
   - findActiveRunStep() 按 agentId 定位活跃步骤
   - 扫描所有公司的 Pipeline Runs 实现跨公司桥接

2. Pipeline 循环执行:
   - 新增 pipeline.loop 配置项
   - Run 完成后自动启动下一轮 (最大 maxLoops=365)
   - loopCount 计数器追踪循环轮次

3. COO 质量门控:
   - 新增 rejectStep() 驳回方法，含驳回历史记录
   - POST /api/agent/task/reject API 端点
   - POST /api/company/:id/pipelines/runs/:runId/reject 路由
   - node bin/lemon.js task reject CLI 命令
   - 驳回后自动唤醒 Agent 重做，注入改进意见

4. COO 模板全面强化:
   - agent.md: 4维度评分体系、质量审核流程图
   - soul.md: 性格、价值观、决策原则
   - tools.md: 新增 task reject 核心工具
   - heartbeat.md: 结构化巡检清单 + 升级规则

- company.js: call heartbeatService._setupAgentHeartbeat after hire
- CEO agent.md: enforce 3-step continuous execution in same turn
- All CXO heartbeat intervals: 5 minutes
- task dispatch message: self-drive directive, use lemon CLI
- bin/lemon.js: add 'task report' command

- PipelineService: define pipelines with ordered agent-assigned steps
- Run lifecycle: start → markStepStarted → advanceStep → complete
- Step output automatically flows as next step input
- Pipeline CRUD + Run management REST API routes
- E2E test: 106/106 passed (Phase 1 + 2 + 3 + 4)

- GoalsService refactored: constructor accepts optional companyId
  - With companyId: goals stored in data/{companyId}/goals/
  - Without: backward-compatible data/goals/ (global)
- Company Goals REST API: full OKR CRUD under /api/company/:id/goals
- OKR isolation verified: different companies have independent goal spaces
- E2E test: 81/81 passed (Phase 1 + 2 + 3)

- scaffoldNewAgent: create agent skeleton via AgentScaffold directly
- depositTemplate: benchmark gating (≥95) + auto-deposit to templates/
- hireWithTraining: full flow (template lookup → scaffold fallback)
- Company route: /hire uses hireWithTraining, new /deposit-template endpoint
- E2E test: 69/69 passed (Phase 1 + Phase 2)

- CompanyService: CRUD (create/get/list/update/shutdown)
- Agent Hiring Pipeline: template lookup → copy → context injection
- Template registry (_registry.json) with CEO and qa-judge initial templates
- resolveAgentDir(companyId, agentId) unified agent directory resolution
- Company REST API routes (/api/company/*)
- E2E test: 46/46 passed